Fitness data for HSERO_RS04295 in Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -2.7 -11.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -2.3 -10.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.7 -11.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.7 -8.0 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.4 -7.2 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -1.2 -6.1 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.0 -6.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.6 -2.5 compare
control NoPredeControl -0.5 -2.6 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.4 compare
stress Lomefloxacin 0.012 mM -0.4 -1.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.4 compare
nitrogen source L-Proline (N) +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.4 compare
control NoPredeControl +0.6 +2.3 compare