Fitness data for HSERO_RS04265 in Herbaspirillum seropedicae SmR1

tyrosine recombinase XerD
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.6)


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group condition fitness t score  
stress Cisplatin 0.003 mg/ml -5.6 -1.6 compare
carbon source D-Sorbitol (C) -4.1 -2.3 compare
carbon source Xylitol (C) -3.8 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.3 -1.3 compare
carbon source D,L-Lactate (C) -3.3 -2.6 compare
carbon source L-Malic (C) -3.3 -2.7 compare
stress Fusidic 0.025 mg/ml -3.1 -1.5 compare
carbon source D-Galactose (C) -3.1 -2.1 compare
plant Control soil assay; outgrowth in LB -3.1 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.1 -1.2 compare
carbon source L-Glutamine (C) -3.0 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.0 -1.2 compare
carbon source D-Lactate (C) -3.0 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -2.8 -2.0 compare
carbon source D-Glucose (C) -2.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -2.8 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -2.7 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.6 -1.4 compare
carbon source Xylitol (C) -2.6 -1.9 compare
carbon source L-Lactate (C) -2.6 -2.0 compare