Fitness data for HSERO_RS04240 in Herbaspirillum seropedicae SmR1
C4-dicarboxylate ABC transporter
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component
KEGG: C4-dicarboxylate-binding protein DctP
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | Glycerol (C) | -1.3 | -2.9 | compare |
| carbon source | D,L-Lactate (C) | -1.3 | -4.7 | compare |
| carbon source | D-Glucose-6-Phosphate (C) | -1.2 | -3.9 | compare |
| carbon source | L-Fucose (C) | -1.1 | -3.8 | compare |
| carbon source | L-Proline (C) | -1.1 | -3.3 | compare |
| carbon source | L-Fucose (C) | -1.1 | -2.0 | compare |
| vitamin | With vitamins t2 | -1.1 | -2.9 | compare |
| plant | Control soil assay; outgrowth in LB | -1.1 | -3.1 | compare |
| carbon source | L-Proline (C) | -1.0 | -3.5 | compare |
| carbon source | Xylitol (C) | -1.0 | -2.3 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -1.0 | -2.0 | compare |
| carbon source | D,L-Lactate (C) | -0.9 | -2.9 | compare |
| carbon source | L-Malic (C) | -0.9 | -2.8 | compare |
| carbon source | succinate (C) | -0.9 | -3.1 | compare |
| carbon source | D-Galactose (C) | -0.9 | -3.6 | compare |
| carbon source | D-Ribose (C) | -0.9 | -2.5 | compare |
| carbon source | Xylitol (C) | -0.9 | -2.1 | compare |
| nutrient | L-Histidine | -0.9 | -3.6 | compare |
| carbon source | L-Lactate (C) | -0.9 | -3.0 | compare |
| nitrogen fixation | L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days | +1.1 | +4.6 | compare |