Fitness data for HSERO_RS04205 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: DedA protein
KEGG: membrane-associated protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -3.0 compare
carbon source D-Gluconic Acid (C) -0.5 -2.5 compare
carbon source a-Ketoglutaric (C) -0.4 -2.3 compare
vitamin No vitamins t2 -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.2 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +1.5 compare
carbon source L-Glutamine (C) +0.5 +2.7 compare
stress Nickel (II) chloride 0.6 mM +0.5 +2.5 compare
carbon source Glycerol (C) +0.5 +2.4 compare
carbon source m-Inositol (C) +0.5 +3.1 compare
carbon source L-Malic (C) +0.5 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.5 compare
stress Sisomicin 0.125 mg/ml +0.6 +2.6 compare
stress Cobalt chloride 0.2 mM +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.9 compare
stress nitrate 200 mM +0.7 +2.7 compare
stress Cisplatin 0.003 mg/ml +0.7 +2.9 compare
stress Lomefloxacin 0.012 mM +1.4 +7.4 compare