Fitness data for HSERO_RS03980 in Herbaspirillum seropedicae SmR1

type III secretion HrcS protein
KEGG: type III secretion protein SctS

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Glucose (C) -1.1 -1.8 compare
carbon source D-Gluconic Acid (C) -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.0 compare
carbon source D-Xylose (C) -0.7 -1.9 compare
carbon source L-Lactate (C) -0.6 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.7 compare
carbon source D-Galacturonic Acid (C) -0.5 -1.1 compare
carbon source D-Glucose (C) -0.5 -1.4 compare
stress Cobalt chloride 0.2 mM +0.6 +2.7 compare
carbon source Carbon source D-Glucose 20 mM +0.6 +2.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.1 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +1.0 +3.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.7 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.2 +1.4 compare