Fitness data for HSERO_RS03700 in Herbaspirillum seropedicae SmR1

type VI secretion protein
SEED: Uncharacterized protein ImpB
KEGG: type VI secretion system protein ImpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -1.1 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.2 compare
carbon source Carbon source D-Glucose 20 mM +0.9 +2.0 compare
carbon source D-Glucose (C) +1.0 +1.4 compare
vitamin With vitamins t2 +1.0 +1.6 compare
carbon source Xylitol (C) +1.0 +1.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +1.0 +2.2 compare
vitamin With vitamins t1 +1.0 +1.7 compare
carbon source L-Lactate (C) +1.0 +1.7 compare
carbon source D,L-Lactate (C) +1.1 +2.1 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +1.1 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +2.3 compare
carbon source a-Ketoglutaric (C) +1.2 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +3.3 compare
carbon source D-Xylose (C) +1.3 +2.0 compare
stress nitrate 200 mM +1.4 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.5 +3.5 compare