Fitness data for HSERO_RS03650 in Herbaspirillum seropedicae SmR1

Mannose isomerase (EC 5.3.1.7) (from data)
Original annotation: N-acyl-D-glucosamine 2-epimerase
SEED: D-mannose isomerase (EC 5.3.1.7)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-mannose (C) -5.6 -10.8 compare
carbon source L-mannose (C) -5.3 -6.2 compare
carbon source D-Mannose (C) -4.8 -7.6 compare
carbon source D-Mannose (C) -4.3 -10.7 compare
carbon source D-Galacturonic Acid (C) -0.6 -1.6 compare
stress Lomefloxacin 0.012 mM -0.6 -0.9 compare
stress sodium fluoride 100 mM -0.6 -1.1 compare
stress nitrate 200 mM -0.5 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -1.8 compare
carbon source D-Ribose (C) +0.4 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
carbon source Xylitol (C) +0.4 +1.3 compare
carbon source D-Glucose-6-Phosphate (C) +0.4 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.8 compare
carbon source pyruvate (C) +0.5 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.6 compare