Fitness data for HSERO_RS03645 in Herbaspirillum seropedicae SmR1

D-mannose ABC transporter, permease component (from data)
Original annotation: ribose ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Mannose (C) -3.4 -5.9 compare
carbon source L-mannose (C) -2.9 -4.6 compare
carbon source L-mannose (C) -2.9 -4.3 compare
carbon source D-Mannose (C) -2.3 -5.5 compare
carbon source m-Inositol (C) -0.5 -2.7 compare
stress A22 0.02 mg/ml -0.4 -2.3 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.6 compare
carbon source L-Fucose (C) -0.4 -1.6 compare
stress Cisplatin 0.003 mg/ml -0.4 -1.4 compare
carbon source D-Galactose (C) -0.4 -1.5 compare
carbon source D-Glucose (C) -0.4 -2.7 compare
carbon source Xylitol (C) -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -1.5 compare
stress Nickel (II) chloride 0.6 mM -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.1 compare