Fitness data for HSERO_RS03640 in Herbaspirillum seropedicae SmR1

D-mannose ABC transporter, ATPase component (from data)
Original annotation: D-ribose transporter ATP-binding protein
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: ribose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Mannose (C) -4.7 -10.9 compare
carbon source L-mannose (C) -4.4 -13.4 compare
carbon source L-mannose (C) -4.3 -13.4 compare
carbon source D-Mannose (C) -3.6 -10.3 compare
nutrient L-Serine -0.4 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.9 compare
carbon source m-Inositol (C) +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.3 compare
stress Chloride stress +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
carbon source Glycerol (C) +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.3 compare
control NoPredeControl +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.8 compare