Fitness data for HSERO_RS03615 in Herbaspirillum seropedicae SmR1

(dimethylallyl)adenosine tRNA methylthiotransferase
SEED: tRNA-i(6)A37 methylthiotransferase
KEGG: bifunctional enzyme involved in thiolation and methylation of tRNA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
control NoPredeControl -1.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.5 compare
carbon source Carbon source Phenylacetic 5 mM -0.9 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.8 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -3.0 compare
carbon source D-Gluconic Acid (C) -0.8 -1.8 compare
carbon source D-Ribose (C) -0.7 -2.2 compare
stress sodium fluoride 100 mM -0.7 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -2.3 compare
carbon source D-Ribose (C) -0.7 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.1 compare