Fitness data for HSERO_RS03475 in Herbaspirillum seropedicae SmR1

NUDIX hydrolase
SEED: Nudix-like NDP and NTP phosphohydrolase YmfB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Glucose (C) -1.7 -2.5 compare
stress Lomefloxacin 0.012 mM -1.5 -2.7 compare
stress nitrate 200 mM -1.3 -3.2 compare
carbon source D-Lactate (C) -0.9 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.4 compare
carbon source D-Lactate (C) -0.9 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.8 compare
carbon source L-Arabinose (C) -0.9 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.9 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
stress A22 0.04 mg/ml -0.8 -1.7 compare
stress sodium fluoride 100 mM -0.8 -1.5 compare
carbon source L-Malic (C) -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.8 compare
carbon source D-Xylose (C) -0.7 -1.6 compare
carbon source L-Fucose (C) -0.7 -0.8 compare
stress Sisomicin 0.125 mg/ml -0.7 -1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +1.0 +4.1 compare