Fitness data for HSERO_RS03395 in Herbaspirillum seropedicae SmR1

peptide methionine sulfoxide reductase
SEED: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
KEGG: peptide-methionine (S)-S-oxide reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source L-Rhamnose (C) -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.5 -2.2 compare
carbon source D-Xylose (C) -0.5 -1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.6 compare
carbon source D-Gluconic Acid (C) -0.5 -1.9 compare
carbon source D-Galactose (C) -0.5 -1.3 compare
nitrogen source L-Glutamic (N); high aeration -0.5 -1.6 compare
carbon source L-Fucose (C) -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.6 compare
carbon source L-Proline (C) -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.2 compare
carbon source D-Galacturonic Acid (C) +0.6 +1.7 compare
carbon source L-Proline (C) +0.6 +2.4 compare
stress Cobalt chloride 0.2 mM +0.7 +2.3 compare
carbon source D-Mannose (C) +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.0 compare