Fitness data for HSERO_RS03380 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Outer membrane protein W precursor
KEGG: outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.6 -6.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.2 -4.9 compare
carbon source L-Fucose (C) -1.0 -2.7 compare
carbon source L-Fucose (C) -0.9 -2.7 compare
carbon source D-Glucose (C) -0.8 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -2.9 compare
carbon source L-Arabinose (C) -0.8 -2.4 compare
carbon source D-Glucose (C) -0.7 -2.0 compare
carbon source D-Galactose (C) -0.7 -2.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.7 -3.8 compare
micoeukaryotes C.elegans, mixed culture-1 -0.7 -2.4 compare
carbon source L-Proline (C) -0.7 -3.0 compare
carbon source L-Rhamnose (C) -0.6 -3.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.6 -3.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.6 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.3 compare
carbon source L-mannose (C) +0.6 +3.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +3.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.0 compare