Fitness data for HSERO_RS03335 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter permease
SEED: Branched-chain amino acid transport protein AzlC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.8 compare
plant Control soil assay; outgrowth in LB -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -1.9 compare
carbon source D,L-Lactate (C) -0.3 -2.2 compare
carbon source L-Rhamnose (C) -0.3 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.3 compare
stress Thallium(I) acetate 0.001 mg/ml -0.3 -1.6 compare
plant Control soil assay; outgrowth in LB -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.0 compare
carbon source D-Gluconic Acid (C) +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.1 compare