Fitness data for HSERO_RS03200 in Herbaspirillum seropedicae SmR1

IMP dehydrogenase
SEED: Large protein containing transglutaminase-like domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
stress Cisplatin 0.003 mg/ml -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.2 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.2 +1.1 compare
vitamin With vitamins t2 +0.2 +1.3 compare
carbon source L-Arabinose (C) +0.2 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.0 compare
supernatant control Vogels_fungal_media 0.1X +0.2 +1.6 compare
carbon source D-Galactose (C) +0.2 +1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +1.5 compare
micoeukaryotes C.elegans, mixed culture-1 +0.2 +1.5 compare
plant Control soil assay; outgrowth in LB +0.3 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.3 compare