Fitness data for HSERO_RS03130 in Herbaspirillum seropedicae SmR1

chemotaxis protein CheY
SEED: Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)
KEGG: two-component system, chemotaxis family, response regulator CheB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -1.2 -8.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.7 -3.6 compare
stress Lomefloxacin 0.012 mM -0.6 -1.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -3.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5 -3.2 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.5 -3.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.5 -3.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.5 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.5 compare
carbon source succinate (C) +0.4 +2.1 compare
carbon source D-Mannose (C) +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.4 +2.9 compare
carbon source L-Fucose (C) +0.4 +1.6 compare
r2a control R2A control +0.4 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +2.1 compare