Fitness data for HSERO_RS03060 in Herbaspirillum seropedicae SmR1

DNA repair protein
SEED: DNA repair protein RecN
KEGG: DNA repair protein RecN (Recombination protein N)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
stress Cisplatin 0.003 mg/ml -2.2 -4.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.2 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.9 -5.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.8 -3.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.8 -3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.6 -2.3 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.5 -3.8 compare
carbon source D-Lactate (C) -1.4 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -2.4 compare
micoeukaryotes C.elegans, mixed culture-2 -1.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.3 -3.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -1.5 compare
stress Lomefloxacin 0.012 mM -1.3 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.2 -3.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.2 -1.6 compare
carbon source L-mannose (C) -1.2 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.2 -2.5 compare