Fitness data for HSERO_RS02990 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: Ferric iron ABC transporter, iron-binding protein
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
control NoPredeControl -0.4 -1.3 compare
vitamin No vitamins t2 -0.3 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.7 compare
stress Cobalt chloride 0.2 mM +0.3 +1.5 compare
carbon source m-Inositol (C) +0.3 +1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3 +1.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.3 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.3 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.3 +1.9 compare
stress Sisomicin 0.125 mg/ml +0.4 +1.6 compare
stress Lomefloxacin 0.012 mM +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +2.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.4 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.4 compare
stress nitrate 200 mM +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.4 compare