Fitness data for HSERO_RS02910 in Herbaspirillum seropedicae SmR1

IclR family transcriptional regulator
SEED: Transcriptional regulator, IclR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D,L-Lactate (C) -1.3 -4.4 compare
carbon source Glycerol (C) -1.2 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -3.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.1 -3.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -1.1 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -2.8 compare
carbon source D,L-Lactate (C) -1.0 -2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -2.7 compare
nutrient L-Serine -0.9 -2.6 compare
carbon source L-Lactate (C) -0.8 -2.4 compare
stress Sisomicin 0.125 mg/ml +0.8 +2.5 compare
stress sodium fluoride 100 mM +0.8 +2.2 compare
carbon source D-Galactose (C) +0.8 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +1.0 compare
carbon source D-Ribose (C) +2.0 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.2 +1.3 compare
carbon source D-Ribose (C) +2.3 +1.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +3.3 +1.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +3.4 +1.4 compare