Fitness data for HSERO_RS02690 in Herbaspirillum seropedicae SmR1

taurine ABC transporter permease
SEED: ABC-type anion transport system, duplicated permease component
KEGG: sulfonate/nitrate/taurine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-mannose (C) -0.7 -3.4 compare
carbon source L-Rhamnose (C) -0.5 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
stress nitrite 20 mM +0.4 +1.7 compare
carbon source D-Lactate (C) +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +2.8 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.9 compare
carbon source L-Proline (C) +0.5 +2.3 compare
stress Lomefloxacin 0.012 mM +0.5 +1.7 compare
nitrogen source L-Proline (N) +0.6 +2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +3.1 compare
stress Cobalt chloride 0.2 mM +0.7 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +2.3 compare