Fitness data for HSERO_RS02640 in Herbaspirillum seropedicae SmR1

dihydrofolate reductase
SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.0 compare
carbon source D-Mannose (C) -0.4 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.3 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.2 compare
r2a control R2A control +0.3 +2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.3 +1.6 compare
carbon source D-Lactate (C) +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.3 +1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.3 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.3 compare
carbon source L-Fucose (C) +0.5 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.4 compare