Fitness data for HSERO_RS02575 in Herbaspirillum seropedicae SmR1

diguanylate cyclase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -1.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.9 compare
carbon source D-Xylose (C) -1.2 -2.3 compare
carbon source D-Ribose (C) -1.2 -1.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.0 -2.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.6 compare
carbon source D-Sorbitol (C) -0.9 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -1.9 compare
carbon source L-Asparagine (C) +0.8 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.5 compare
stress nitrite 20 mM +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.4 compare
stress Fusidic 0.025 mg/ml +0.9 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +2.3 compare
carbon source Glycerol (C) +1.0 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.7 +2.1 compare