Fitness data for HSERO_RS02510 in Herbaspirillum seropedicae SmR1

transketolase
SEED: Transketolase (EC 2.2.1.1)
KEGG: transketolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
r2a control R2A control -0.5 -2.6 compare
stress Sisomicin 0.125 mg/ml -0.3 -1.3 compare
carbon source L-Arabinose (C) +0.3 +1.2 compare
nitrogen source L-Glutamic (N); high aeration +0.3 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.2 compare
carbon source L-mannose (C) +0.3 +2.2 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +1.9 compare
stress Cobalt chloride 0.2 mM +0.4 +1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
carbon source pyruvate (C) +0.4 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.3 compare
nitrogen source Ammonium chloride (N); low aeration +0.4 +2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.9 compare