Fitness data for HSERO_RS02460 in Herbaspirillum seropedicae SmR1

UDP pyrophosphate phosphatase
SEED: Undecaprenyl-diphosphatase (EC 3.6.1.27)
KEGG: undecaprenyl-diphosphatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -0.8 -1.5 compare
plant Control soil assay; outgrowth in LB -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.9 compare
carbon source D-Mannose (C) -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.3 compare
carbon source L-Malic (C) -0.4 -1.3 compare
stress sodium fluoride 100 mM -0.4 -1.3 compare
stress Cobalt chloride 0.2 mM -0.4 -1.0 compare
carbon source Xylitol (C) -0.4 -0.7 compare
carbon source D-Lactate (C) +0.4 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.5 compare
control NoPredeControl +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +1.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.5 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.3 compare
carbon source L-Fucose (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +1.7 compare