Fitness data for HSERO_RS02295 in Herbaspirillum seropedicae SmR1

Rieske (2Fe-2S) protein
SEED: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Mannose (C) -0.5 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.5 +3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +3.0 compare
carbon source D-Sorbitol (C) +0.5 +1.6 compare
carbon source D-Gluconic Acid (C) +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.9 compare
vitamin With vitamins t2 +0.5 +2.1 compare
control NoPredeControl +0.5 +1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.5 compare
vitamin No vitamins t2 +0.6 +2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.7 compare