Fitness data for HSERO_RS02285 in Herbaspirillum seropedicae SmR1

nitrate ABC transporter substrate-binding protein
SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
stress Lomefloxacin 0.012 mM -0.4 -1.6 compare
carbon source D-Ribose (C) -0.4 -1.8 compare
carbon source D-Galactose (C) -0.4 -1.7 compare
carbon source D-Lactate (C) -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +1.7 compare
carbon source D-Galactose (C) +0.3 +2.1 compare
nutrient L-Histidine +0.3 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +1.8 compare
carbon source L-Rhamnose (C) +0.3 +2.2 compare
nutrient L-Serine +0.3 +1.8 compare
nitrogen source nitrate (N); low aeration +0.3 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.1 compare