Fitness data for HSERO_RS02220 in Herbaspirillum seropedicae SmR1

xylulokinase
SEED: Xylulose kinase (EC 2.7.1.17)
KEGG: xylulokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Sorbitol (C) -4.0 -8.1 compare
carbon source D-Mannitol (C) -3.0 -11.2 compare
carbon source D-Mannitol (C) -2.9 -12.8 compare
carbon source Xylitol (C) -0.7 -3.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.5 compare
carbon source Glycerol (C) -0.5 -3.1 compare
carbon source D-Glucose (C) -0.5 -1.8 compare
carbon source L-mannose (C) -0.4 -3.0 compare
plant Control soil assay; outgrowth in LB +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
control NoPredeControl +0.4 +1.5 compare
carbon source pyruvate (C) +0.5 +2.4 compare
carbon source succinate (C) +0.5 +2.3 compare
carbon source D,L-Lactate (C) +0.5 +3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.1 compare