Fitness data for HSERO_RS02210 in Herbaspirillum seropedicae SmR1

sugar ABC transporter ATP-binding protein
SEED: Various polyols ABC transporter, ATP-binding component
KEGG: sorbitol/mannitol transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Mannitol (C) -4.3 -6.5 compare
carbon source D-Sorbitol (C) -3.3 -6.5 compare
carbon source D-Mannitol (C) -3.2 -8.4 compare
carbon source Xylitol (C) -1.5 -3.1 compare
control NoPredeControl -0.7 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -3.1 compare
carbon source D-Xylose (C) -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.1 compare
carbon source D-Gluconic Acid (C) -0.6 -1.2 compare
carbon source D-Lactate (C) -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.2 compare
carbon source D-Glucose-6-Phosphate (C) -0.5 -1.7 compare
stress sodium fluoride 100 mM -0.5 -1.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +1.6 compare
carbon source Glycerol (C) +0.6 +3.0 compare