Fitness data for HSERO_RS02195 in Herbaspirillum seropedicae SmR1

sugar ABC transporter permease
SEED: Various polyols ABC transporter, permease component 1
KEGG: sorbitol/mannitol transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Sorbitol (C) -3.2 -5.4 compare
carbon source D-Mannitol (C) -3.2 -6.3 compare
carbon source D-Mannitol (C) -3.1 -9.8 compare
carbon source Xylitol (C) -1.3 -4.1 compare
carbon source Xylitol (C) -1.0 -4.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.1 compare
carbon source D-Glucose (C) -0.5 -1.5 compare
carbon source D-Xylose (C) -0.4 -1.3 compare
carbon source pyruvate (C) -0.4 -1.5 compare
carbon source D-Lactate (C) -0.4 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.0 compare
stress sodium fluoride 100 mM +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.1 compare
micoeukaryotes C.elegans, mixed culture-1 +0.6 +2.8 compare