Fitness data for HSERO_RS02160 in Herbaspirillum seropedicae SmR1

DNA-dependent helicase
SEED: ATP-dependent DNA helicase UvrD/PcrA
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


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group condition fitness t score  
stress nitrate 200 mM -5.6 -3.3 compare
stress Cisplatin 0.003 mg/ml -4.5 -2.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -4.5 -3.3 compare
supernatant control Vogels_fungal_media 0.1X -3.9 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.4 -2.4 compare
carbon source Xylitol (C) -3.3 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -3.1 -2.2 compare
carbon source L-Arabinose (C) -3.1 -1.7 compare
carbon source D-Galacturonic Acid (C) -3.0 -2.9 compare
carbon source a-Ketoglutaric (C) -3.0 -4.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.0 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.9 -1.9 compare
carbon source D-Ribose (C) -2.9 -2.5 compare
carbon source succinate (C) -2.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -2.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.7 -1.9 compare
nitrogen source L-Proline (N) -2.6 -2.4 compare
carbon source L-Malic (C) -2.6 -1.9 compare
stress Nickel (II) chloride 0.6 mM -2.4 -1.5 compare
carbon source succinate (C) -2.4 -1.4 compare