Fitness data for HSERO_RS02005 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Outer membrane lipoprotein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Xylitol (C) -2.6 -2.8 compare
control NoPredeControl -0.7 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.7 compare
carbon source L-Fucose (C) +0.7 +1.8 compare
carbon source D-Mannitol (C) +0.7 +1.7 compare
nitrogen source Ammonium chloride (N); low aeration +0.7 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.8 +2.1 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.8 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +2.1 compare
carbon source D,L-Malic Acid (C) +0.8 +2.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.8 +2.5 compare
carbon source D-Galacturonic Acid (C) +0.8 +2.3 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.8 +2.7 compare
carbon source L-Fucose (C) +0.8 +2.0 compare
carbon source L-Fucose (C) +0.9 +3.3 compare
stress Cobalt chloride 0.2 mM +1.0 +2.4 compare
carbon source D-Glucose (C) +1.0 +3.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +1.0 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +2.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.6 +2.7 compare