Fitness data for HSERO_RS01990 in Herbaspirillum seropedicae SmR1
shikimate 5-dehydrogenase
SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
KEGG: shikimate dehydrogenase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.6)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | L-Glutamine (C) | -5.9 | -5.6 | compare |
| carbon source | L-mannose (C) | -5.3 | -8.5 | compare |
| nutrient | casaminos | -5.1 | -8.5 | compare |
| carbon source | L-Glutamine (C) | -4.9 | -4.1 | compare |
| nutrient | casaminos | -4.8 | -5.9 | compare |
| carbon source | L-mannose (C) | -4.8 | -9.7 | compare |
| carbon source | L-Arabinose (C) | -4.5 | -4.7 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | -4.5 | -5.0 | compare |
| carbon source | L-Arabinose (C) | -4.4 | -4.1 | compare |
| carbon source | Carbon source Phenylacetic 5 mM | -4.4 | -8.5 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X | -4.4 | -6.1 | compare |
| carbon source | D-Xylose (C) | -4.1 | -4.5 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | -4.0 | -5.4 | compare |
| carbon source | Carbon source Phenylacetic 5 mM | -3.9 | -8.1 | compare |
| carbon source | L-Malic (C) | -3.9 | -7.5 | compare |
| carbon source | D,L-Lactate (C) | -3.8 | -7.4 | compare |
| carbon source | succinate (C) | -3.7 | -7.1 | compare |
| carbon source | D-Glucose (C) | -3.7 | -9.3 | compare |
| carbon source | D,L-Malic Acid (C) | -3.6 | -6.5 | compare |
| carbon source | D-Lactate (C) | -3.6 | -7.5 | compare |