Fitness data for HSERO_RS01975 in Herbaspirillum seropedicae SmR1

4-hydroxybenzoate synthetase
SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
KEGG: chorismate--pyruvate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Lactate (C) -2.6 -4.7 compare
carbon source L-Lactate (C) -2.0 -5.0 compare
carbon source L-Proline (C) -1.5 -5.4 compare
carbon source D-Glucose (C) -1.2 -3.2 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.0 -2.8 compare
carbon source L-Glutamine (C) -1.0 -3.4 compare
carbon source D,L-Lactate (C) -1.0 -3.1 compare
carbon source L-Proline (C) -1.0 -1.9 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.8 -2.6 compare
carbon source D-Xylose (C) -0.8 -1.3 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.8 -2.5 compare
nitrogen source L-Proline (N) -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.8 compare
carbon source D-Gluconic Acid (C) -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.5 compare
carbon source D-Mannose (C) +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.8 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.3 +1.8 compare