Fitness data for HSERO_RS01555 in Herbaspirillum seropedicae SmR1

RND transporter
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.9 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.9 -4.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.8 -4.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -4.1 compare
carbon source L-Lactate (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.3 compare
plant Control soil assay; outgrowth in LB -0.3 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.6 compare
stress Nickel (II) chloride 0.6 mM +0.3 +1.6 compare
stress Dimethyl Sulfoxide 5 vol% +0.3 +1.9 compare
carbon source D,L-Malic Acid (C) +0.3 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.6 compare
carbon source Glycerol (C) +0.3 +1.6 compare
stress Sisomicin 0.125 mg/ml +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.3 compare
carbon source L-Malic (C) +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.6 compare
stress Cobalt chloride 0.2 mM +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.2 compare