Fitness data for HSERO_RS01420 in Herbaspirillum seropedicae SmR1

serine/threonine dehydratase
SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
KEGG: threonine dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Asparagine (C) -0.6 -2.0 compare
stress Cobalt chloride 0.2 mM -0.5 -2.2 compare
carbon source D-Mannose (C) -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.0 compare
stress Lomefloxacin 0.012 mM -0.4 -1.1 compare
stress Cisplatin 0.003 mg/ml -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
carbon source D,L-Lactate (C) +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +2.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.6 compare
carbon source D,L-Malic Acid (C) +0.5 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.7 compare