Fitness data for HSERO_RS01345 in Herbaspirillum seropedicae SmR1

sugar ABC transporter substrate-binding protein
SEED: Multiple sugar ABC transporter, substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Fucose (C) -0.9 -1.7 compare
carbon source Xylitol (C) -0.6 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.7 compare
carbon source m-Inositol (C) -0.5 -1.2 compare
stress Lomefloxacin 0.012 mM -0.5 -1.4 compare
stress Cobalt chloride 0.2 mM -0.5 -1.6 compare
carbon source D-Xylose (C) -0.5 -1.2 compare
carbon source L-Arabinose (C) +0.5 +1.5 compare
stress Fusidic 0.025 mg/ml +0.5 +1.9 compare
control NoPredeControl +0.5 +1.3 compare
carbon source L-Arabinose (C) +0.5 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.6 +1.8 compare
carbon source D-Galactose (C) +0.8 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +3.5 compare