Fitness data for HSERO_RS01205 in Herbaspirillum seropedicae SmR1

2-hydroxy-acid oxidase
SEED: L-lactate dehydrogenase (EC 1.1.2.3)
KEGG: (S)-mandelate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Mannose (C) -0.8 -3.8 compare
carbon source D-Mannose (C) -0.7 -3.5 compare
carbon source L-mannose (C) -0.5 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
r2a control R2A control -0.3 -2.2 compare
carbon source L-mannose (C) -0.3 -1.7 compare
stress Cisplatin 0.003 mg/ml -0.3 -1.5 compare
stress Sisomicin 0.125 mg/ml -0.3 -1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.3 compare
nutrient casaminos +0.3 +1.7 compare
nutrient Min media with glucose +0.3 +1.8 compare
carbon source D-Glucose-6-Phosphate (C) +0.3 +1.9 compare
carbon source L-Asparagine (C) +0.3 +2.0 compare
carbon source D-Gluconic Acid (C) +0.4 +2.2 compare
carbon source D-Galacturonic Acid (C) +0.4 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
carbon source Xylitol (C) +0.4 +2.0 compare
carbon source D-Ribose (C) +0.5 +2.5 compare