Fitness data for HSERO_RS01195 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter permease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -3.6 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -3.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -2.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.4 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
carbon source D-Mannose (C) -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
carbon source Xylitol (C) -0.4 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.0 compare
carbon source Carbon source D-Glucose 20 mM +0.4 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.4 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.4 compare