Fitness data for HSERO_RS01160 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.0 compare
stress Lomefloxacin 0.012 mM -0.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.2 compare
carbon source D-Mannose (C) +0.6 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.4 compare
carbon source D-Glucose (C) +0.7 +1.5 compare
carbon source D-Mannitol (C) +0.7 +2.5 compare
stress Chloride stress +0.7 +2.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.7 +3.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.7 +1.8 compare
carbon source D-Glucose-6-Phosphate (C) +0.7 +1.5 compare
nitrogen source L-Glutamic (N); high aeration +0.7 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.8 compare
carbon source L-Arabinose (C) +0.7 +2.2 compare
carbon source L-Rhamnose (C) +0.8 +1.9 compare
stress Sisomicin 0.125 mg/ml +0.8 +1.6 compare
stress sodium fluoride 100 mM +0.8 +1.9 compare
carbon source D-Galactose (C) +0.8 +1.6 compare
nitrogen source nitrate (N); low aeration +0.9 +3.6 compare