Fitness data for HSERO_RS01150 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Permeases of the major facilitator superfamily
KEGG: MFS transporter, MHS family, proline/betaine transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -3.3 compare
carbon source D-Glucose-6-Phosphate (C) -0.6 -2.6 compare
carbon source L-Rhamnose (C) -0.5 -2.5 compare
carbon source Xylitol (C) -0.4 -1.7 compare
carbon source Glycerol (C) -0.4 -2.1 compare
carbon source D,L-Lactate (C) -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 compare
carbon source D-Mannose (C) -0.4 -2.3 compare
carbon source D-Glucose-6-Phosphate (C) -0.3 -1.7 compare
carbon source L-Arabinose (C) -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.9 compare
carbon source L-Malic (C) -0.3 -1.6 compare
r2a control R2A control +0.3 +1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.3 +2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.2 compare