Fitness data for HSERO_RS00935 in Herbaspirillum seropedicae SmR1

TonB-denpendent receptor
SEED: Ferrichrome-iron receptor
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.3 compare
carbon source Xylitol (C) -0.3 -1.9 compare
plant Control soil assay; outgrowth in LB -0.3 -1.9 compare
carbon source m-Inositol (C) -0.3 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -2.2 compare
stress Lomefloxacin 0.012 mM -0.3 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.9 compare
carbon source L-Arabinose (C) -0.3 -1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.3 -1.7 compare
stress Nickel (II) chloride 0.6 mM -0.2 -1.5 compare
nitrogen source L-Proline (N) -0.2 -1.5 compare
stress Thallium(I) acetate 0.001 mg/ml -0.2 -1.5 compare
carbon source Xylitol (C) -0.2 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.4 compare
nutrient L-Histidine +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.2 compare