Fitness data for HSERO_RS00880 in Herbaspirillum seropedicae SmR1

ornithine cyclodeaminase
SEED: Ornithine cyclodeaminase (EC 4.3.1.12)
KEGG: ornithine cyclodeaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Proline (C) -1.9 -4.4 compare
carbon source L-Proline (C) -1.8 -5.4 compare
nitrogen source L-Proline (N) -1.6 -3.9 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
plant Control soil assay; outgrowth in LB -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.1 compare
carbon source succinate (C) +0.4 +2.1 compare
carbon source L-Lactate (C) +0.4 +1.6 compare
carbon source D,L-Lactate (C) +0.5 +2.2 compare
stress Dimethyl Sulfoxide 5 vol% +0.5 +1.8 compare
carbon source L-Malic (C) +0.5 +2.6 compare
carbon source L-Asparagine (C) +0.5 +2.4 compare
carbon source a-Ketoglutaric (C) +0.5 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.2 compare
carbon source Glycerol (C) +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.2 compare