Fitness data for HSERO_RS00740 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
control NoPredeControl -0.7 -1.4 compare
carbon source D-Gluconic Acid (C) -0.4 -2.4 compare
carbon source D-Galactose (C) -0.4 -2.4 compare
carbon source D-Galacturonic Acid (C) -0.4 -2.6 compare
carbon source D-Mannitol (C) -0.4 -1.9 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.2 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.6 compare
carbon source D-Xylose (C) -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
carbon source D-Mannitol (C) -0.4 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.8 compare
vitamin With vitamins t1 +0.4 +1.5 compare
carbon source Xylitol (C) +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6 +2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.7 compare