Fitness data for HSERO_RS00735 in Herbaspirillum seropedicae SmR1

Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data)
Original annotation: 2,5-dioxovalerate dehydrogenase
SEED: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
KEGG: NADP-dependent aldehyde dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -6.7 -4.6 compare
carbon source L-Arabinose (C) -4.0 -3.4 compare
carbon source D-Galacturonic Acid (C) -3.3 -4.7 compare
carbon source D-Xylose (C) -3.1 -3.6 compare
carbon source L-Arabinose (C) -2.8 -3.6 compare
carbon source D-Xylose (C) -2.7 -5.5 compare
carbon source D-Xylose (C) -2.4 -5.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.5 compare
control NoPredeControl -0.7 -1.9 compare
carbon source Xylitol (C) +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.1 compare
carbon source D,L-Lactate (C) +0.7 +3.0 compare
carbon source pyruvate (C) +0.8 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +1.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.9 +4.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.3 compare
carbon source L-Lactate (C) +1.0 +2.0 compare
carbon source L-Fucose (C) +1.1 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +4.2 compare