Fitness data for HSERO_RS00425 in Herbaspirillum seropedicae SmR1

ammonia channel protein
SEED: Ammonium transporter
KEGG: ammonium transporter, Amt family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -2.8 -10.7 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -2.7 -11.6 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -2.7 -11.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5 -7.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.4 -6.3 compare
nitrogen source nitrate (N); low aeration -1.4 -8.2 compare
nitrogen source nitrate (N); high aeration -1.4 -5.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.4 -6.5 compare
nitrogen source nitrate (N); high aeration -1.4 -5.4 compare
nitrogen source nitrate (N); low aeration -1.3 -8.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -5.3 compare
plant Control soil assay; outgrowth in LB -0.7 -2.7 compare
plant Control soil assay; outgrowth in LB -0.6 -2.7 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.6 -2.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.6 -4.1 compare
carbon source D-Galactose (C) +0.5 +2.5 compare
carbon source D-Xylose (C) +0.5 +2.7 compare
carbon source L-Lactate (C) +0.5 +1.9 compare
carbon source succinate (C) +0.6 +2.6 compare
carbon source L-Fucose (C) +0.6 +2.5 compare