Fitness data for HSERO_RS00290 in Herbaspirillum seropedicae SmR1

nitrate ABC transporter substrate-binding protein
SEED: Taurine-binding periplasmic protein TauA
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
control NoPredeControl -1.1 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.9 compare
plant Control soil assay; outgrowth in LB -0.7 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.8 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6 +2.9 compare
carbon source L-Arabinose (C) +0.6 +1.4 compare
carbon source L-Lactate (C) +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.6 compare
carbon source Glycerol (C) +0.8 +2.3 compare
carbon source D-Mannose (C) +0.8 +2.3 compare
stress sodium fluoride 100 mM +0.8 +1.9 compare
carbon source Xylitol (C) +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +2.1 compare