Fitness data for HMPREF1078_RS13880 in Parabacteroides merdae CL09T00C40
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
SEED: GTPase and tRNA-U34 5-formylation enzyme TrmE
KEGG: tRNA modification GTPase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)
Or see all 56 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | D-Galactose 10 mg/mL (C) | -1.5 | -5.9 | compare |
| carbon source | D-Galactose 10 mg/mL (C) | -1.2 | -4.9 | compare |
| carbon source | Beta-Lactose 10 mg/mL (C) | -0.9 | -5.0 | compare |
| carbon source | Beta-Lactose 10 mg/mL (C) | -0.7 | -4.0 | compare |
| carbon source | Pectin from citrus peel; autoclaved 2.5 mg/mL (C) | -0.6 | -2.4 | compare |
| carbon source | Mucin from porcine stomach type II 2.5 mg/mL (C) | -0.6 | -2.5 | compare |
| carbon source complex media | Brucella 1 x (C) | -0.5 | -2.5 | compare |
| carbon source | D-Mannose 10 mg/mL (C) | -0.5 | -2.6 | compare |
| carbon source | D-Mannose 10 mg/mL (C) | -0.4 | -2.2 | compare |
| carbon source | Mucin from porcine stomach type III 2.5 mg/mL (C) | -0.4 | -1.2 | compare |
| carbon source complex media | GAM 1 x (C) | -0.3 | -1.5 | compare |
| carbon source | Laminarin from Laminaria digitata 2.5 mg/mL (C) | -0.3 | -1.4 | compare |
| carbon source complex media | BHI 1 x (C) | -0.3 | -1.7 | compare |
| carbon source | D-Raffinose 10 mg/mL (C) | -0.3 | -1.5 | compare |
| carbon source | Dextrin from potato starch 2.5 mg/mL (C) | +0.3 | +1.4 | compare |
| carbon source | D-Xylose 10 mg/mL (C) | +0.8 | +4.5 | compare |
| carbon source | Xylan from corncob 2.5 mg/mL (C) | +1.0 | +5.6 | compare |
| carbon source | D-Maltose 10 mg/mL (C) | +1.1 | +6.1 | compare |
| carbon source | D-Xylose 10 mg/mL (C) | +1.6 | +9.7 | compare |
| carbon source | Xylan from corncob 2.5 mg/mL (C) | +1.6 | +8.6 | compare |