Fitness data for HMPREF1058_RS20490 in Phocaeicola vulgatus CL09T03C04

RNA polymerase subunit sigma-70

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 -2.5 -2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 -1.9 -2.3 compare
carbon source D-Glucose 5 mg/ml (C) -1.4 -2.6 compare
carbon source D-Glucose (C) -1.3 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -1.2 -2.1 compare
carbon source D-Glucose (C) -1.2 -1.3 compare
carbon source D-Mannose 20 mM (C) -1.1 -2.4 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -1.1 -2.9 compare
carbon source D-Galactose (C) -1.0 -1.9 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.0 -1.6 compare
carbon source Fructose-6-phosphate (C) -1.0 -2.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -1.0 -1.7 compare
carbon source D-Glucose-6-Phosphate (C) -1.0 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 -0.8 -1.6 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.8 -1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day6 +0.8 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 +0.9 +2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 +1.0 +1.5 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) +1.2 +2.5 compare
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +1.5 +3.6 compare