Fitness data for HMPREF1058_RS18770 in Phocaeicola vulgatus CL09T03C04

hypothetical protein
SEED: Very-short-patch mismatch repair endonuclease (G-T specific)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -3.8 -1.5 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) -3.2 -3.0 compare
carbon source Dextran 5 mg/ml (C) -2.3 -0.9 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -2.2 -2.5 compare
carbon source D-Mannose (C) -2.1 -2.0 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -2.1 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -2.1 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1 -2.0 -0.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -2.0 -1.4 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -1.9 -1.8 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -1.8 -1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 +1.9 +1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 +1.9 +1.8 compare
carbon source L-Rhamnose 20 mM (C) +2.0 +5.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 +2.0 +1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +2.0 +1.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +2.0 +1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 +2.3 +2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2 +2.5 +2.4 compare
carbon source D-Arabinose 20 mM (C) +5.8 +3.6 compare