Fitness data for HMPREF1058_RS18610 in Phocaeicola vulgatus CL09T03C04

Crp/Fnr family transcriptional regulator
SEED: Hcp transcriptional regulator HcpR (Crp/Fnr family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Mannose 20 mM (C) -1.0 -3.4 compare
carbon source Galactose 1-phosphate dipotassium salt (C) -0.9 -2.8 compare
carbon source Polygalacturonic 5 mg/ml (C) -0.9 -2.4 compare
carbon source D-Maltose 20 mM (C) -0.9 -3.2 compare
carbon source NAG (C) -0.9 -2.7 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.7 -2.8 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) -0.7 -2.5 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.7 -2.2 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.7 -1.8 compare
carbon source D-Galacturonic Acid 20 mM (C) +0.7 +2.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 +0.7 +1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 +0.7 +2.1 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.7 +1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 +0.8 +2.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.8 +2.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 +0.8 +2.5 compare
carbon source Amylose from potato 5 mg/ml (C) +0.8 +2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 +0.9 +2.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +1.0 +3.3 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.7 +2.6 compare